If you're not familiar with mindmapping applications, check this one out at MindMeister. If you have John Ploof for thesis next semester, you may see that he's a big fan of mindmapping (though he tends to do his with post-it notes). It's a great process for plotting out ideas and brainstorming, particularly at the beginning of a research process like a thesis! :)
This particular mindmap has an extra Cyberped bonus because it's a mindmap of online collaboration tools (and appears to be quite comprehensive!). Check it out for some other great categories of collaborative resources (file sharing, wikis, social networks, video conferencing, event scheduling, etc...).
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